π BioNeMo: A Framework for Developing AI Models for Drug Design.
NVIDIA BioNeMo2 Framework is a set of tools, libraries, and models for computational drug discovery and design.
βΆοΈ Pre-trained models:
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ESM-2 is a pre-trained bidirectional encoder (BERT-like) for amino acid sequences. BioNeMo2 includes checkpoints with parameters 650M and 3B;
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Geneformer is a tabular scoring model that generates a dense representation of a cell's scRNA by examining co-expression patterns in individual cells.
βΆοΈ Datasets:
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CELLxGENE is a collection of publicly available single-cell datasets collected by the CZI (Chan Zuckerberg Initiative) with a total volume of 24 million cells;
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UniProt is a database of clustered sets of protein sequences from UniProtKB, created on the basis of translated genomic data.
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Project pageπ‘
Documentationπ₯
GitHub@Machine_learn