TGViewer
Graph Machine Learning Graph Machine Learning @graphml · 6.59K subscribers
Post #698 10.2K
Geometric DL News: 200M proteins in AlphaFold DB, Euclidean nets, Italian GDL Summer School, Diffusers

This week brought us a bunch of news and new materials:

- DeepMind announced expanding the AlphaFold DB to 200 million protein structures. Celebrating 1Y anniversary since the release of groundbreaking AlphaFold 2, DeepMind mentions a huge success of the system among scientists all over the world - more than 500.000 researchers from 190 countries have accesses AlphaFold predictions - and sketches further plans to apply the outcomes in other areas such as drug discovery, fusion, and climate change

- Mario Geiger (MIT) and Tess Smidt (MIT) released an updated version of the writeup on e3nn - the most popular Python library to build Euclidean Neural Networks, a basis for many new cool works like Steerable GNNs and SE(3)-Transformers. The writeup includes simple intuitions behind spherical harmonics, tensor product, irreducible representations, and other key building blocks - if you work on equivariant architectures, you probably do that with e3nn 😉

- 🇮🇹 First Italian School on Geometric Deep Learning releases all slides and Colab Notebooks on equivariance, topology, differential geometry and other topics covered by top speakers including Michael Bronstein, Cristian Bodnar, Maurice Weiler, Pim de Haan, and Francesco Di Giovanni.

- Following the hottest 2022 trend, HuggingFace 🤗 aims to tame the wilds of diffusion models and releases Diffusers 🧨, a single library to build and train diffusion models of all modalities - image generation, text generation, and, of course, graph generation! The PR with GeoDiff, a SOTA molecule generation model from ICLR 2022, is already prepared 🚀
Google DeepMind AlphaFold reveals the structure of the protein universe Today, in partnership with EMBL’s European Bioinformatics Institute (EMBL-EBI), we’re now releasing predicted structures for nearly all catalogued proteins known to science, which will expand the AlphaFold DB by over 200x - from nearly 1 million structures…
More from @graphml
  1. Mar 18, 2026🚀 LOGML 2026 — Mentor Applications Open (Deadline extended!) The LOGML (London Geometry a…
  2. Feb 28, 2026PhD Position in Graph Learning at the University of Vienna, Austria A PhD student position…
  3. Feb 16, 2026Uni Leipzig looking for a motivated student for a PhD position in Graph Machine Learning a…
  4. Oct 2, 2025Tired of evaluating your graph ML models on Cora, CiteSeer, and PubMed? We have a better b…
  5. Oct 2, 2025How can we create general-purpose graph foundation models? (by Dmitry Eremeev) For a long…
  6. Sep 21, 2025GraphML News (September 2025) - Stanford Graph Learning WS, MoML, RF Diffusion 3 While the…
Threads Profile ViewerView any public Threads profile without an account.Open ThreadLook →Writing with AI? Make it sound human.Metric37 rewrites AI drafts so they read naturally. Free AI detector, 1,500 words free.Try Metric37 →