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Post #277 326
Advancing chemical reaction prediction in data-scarce drug discovery with active and geometric deep learning🔥

https://www.nature.com/articles/s43588-026-01063-0

Here, to address this, we present an integrated closed-loop workflow that combines efficient reaction data acquisition with high-accuracy deep learning. We developed an active learning strategy, driven by a tree-based ensemble, to guide the acquisition of the most informative laboratory experiments. This experimental campaign yielded a diverse benchmark for C–H borylation. The bespoke dataset allowed us to train and evaluate geometric graph neural networks.

We demonstrate that augmenting these symmetry-aware models with self-supervised auxiliary tasks consistently improves performance for both reaction outcome prediction and regioselectivity prediction. Prospective tests on unseen substrates, featuring challenging N-heteroaryl motifs, pinpointed the correct borylation positions in all cases, illustrating the practical utility of our workflow for efficient drug optimization.


📕 Nature computational science (IF = 20.3)
Nature Advancing chemical reaction prediction in data-scarce drug discovery with active and geometric deep learning Nature Computational Science - Researchers pair active learning with geometric deep learning to predict the outcome and site selectivity of chemical reactions from scarce data, guiding experiments...
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