پایگاه‌های داده‌ای که هر پژوهشگر باید بشناسه | قسمت اول

پایگاه‌های مرتبط با ژن، ژنتیک و ژنوم:

NCBI:
https://www.ncbi.nlm.nih.gov/

GenBank:
https://www.ncbi.nlm.nih.gov/genbank/

Ensembl:
https://www.ensembl.org/

UCSC Genome Browser:
https://genome.ucsc.edu/

ENA:
https://www.ebi.ac.uk/ena/browser/

ClinVar:
https://www.ncbi.nlm.nih.gov/clinvar/search/

dbSNP:
https://www.ncbi.nlm.nih.gov/snp/

gnomAD:
https://gnomad.broadinstitute.org/

OMIM:
https://omim.org/

DECIPHER:
https://www.deciphergenomics.org/

HGNC:
https://www.genenames.org/

پروتئین و ساختار

UniProt:
https://www.uniprot.org/

InterPro:
https://www.ebi.ac.uk/interpro/

PROSITE:
https://prosite.expasy.org/

PDB:
https://www.rcsb.org/

AlphaFold Protein Structure Database:
https://alphafold.ebi.ac.uk/

BRENDA:
https://www.brenda-enzymes.org/

برهم‌کنش‌های مولکولی

STRING:
https://string-db.org

BioGRID:
https://thebiogrid.org

IntAct:
https://www.ebi.ac.uk/intact

MINT:
https://mint.bio.uniroma2.it

بیان ژن و سلول

GEO:
https://www.ncbi.nlm.nih.gov/geo

ArrayExpress / BioStudies : https://www.ebi.ac.uk/biostudies/arrayexpress

Human Protein Atlas:
https://www.proteinatlas.org

CellMarker: http://bio-bigdata.hrbmu.edu.cn/CellMarker

PanglaoDB:
https://panglaodb.se

CELLxGENE: https://cellxgene.cziscience.com

Single Cell Portal: https://singlecell.broadinstitute.org/single_cell